STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ51646.1Hypothetical protein. (377 aa)    
Predicted Functional Partners:
AFZ49773.1
PFAM: Glycerophosphoryl diester phosphodiesterase family.
 
      0.742
AFZ49866.1
Hypothetical protein.
  
     0.707
AFZ50664.1
Hypothetical protein.
  
     0.611
AFZ49750.1
Molecular chaperone GrpE (heat shock protein); PFAM: GrpE.
  
     0.597
AFZ51838.1
Hypothetical protein.
  
     0.553
AFZ51645.1
Hypothetical protein.
       0.547
AFZ50141.1
Organic solvent tolerance protein OstA; PFAM: Protein of unknown function (DUF1239).
  
     0.520
AFZ49034.1
Putative membrane protein; PFAM: TM2 domain.
  
     0.511
AFZ51081.1
Hypothetical protein.
  
     0.506
AFZ50054.1
Hypothetical protein.
  
     0.493
Your Current Organism:
Dactylococcopsis salina
NCBI taxonomy Id: 13035
Other names: D. salina PCC 8305, Dactylococcopsis salina PCC 8305, Dactylococcopsis sp. PCC 8305, Myxobactron salinum PCC 8305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.