Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFZ51726.1Uncharacterized protein involved in formation of curli polymers; PFAM: Curli production assembly/transport component CsgG. (340 aa)    
Predicted Functional Partners:
AFZ50795.1
Growth inhibitor; PFAM: PemK-like protein.
  
   
 0.604
AFZ51165.1
Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: OmpA family.
    
 
 0.595
AFZ51987.1
Hypothetical protein.
  
     0.504
AFZ51725.1
Small GTP-binding protein domain protein; PFAM: GTPase of unknown function; Domain of unknown function (DUF697); TIGRFAM: small GTP-binding protein domain.
       0.488
AFZ49375.1
Hypothetical protein.
  
     0.446
AFZ51660.1
Hypothetical protein.
  
     0.444
Your Current Organism:
Dactylococcopsis salina
NCBI taxonomy Id: 13035
Other names: D. salina PCC 8305, Dactylococcopsis salina PCC 8305, Dactylococcopsis sp. PCC 8305, Myxobactron salinum PCC 8305
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