STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ51858.1PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family. (341 aa)    
Predicted Functional Partners:
AFZ51857.1
Anthranilate phosphoribosyltransferase; PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain.
 
   
 0.830
AFZ51859.1
PFAM: PBS lyase HEAT-like repeat.
     
 0.800
AFZ52111.1
Hypothetical protein.
  
   
 0.707
AFZ51745.1
Hypothetical protein.
  
     0.693
AFZ48949.1
Hypothetical protein.
  
     0.691
AFZ49733.1
PFAM: Protein of unknown function (DUF2555).
  
     0.596
AFZ51769.1
precorrin-3B synthase; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: precorrin-3B synthase.
     
 0.527
AFZ51308.1
Hypothetical protein.
  
     0.521
AFZ50069.1
TIGR03943 family protein; PFAM: Domain of unknown function (DUF1980); TIGRFAM: TIGR03943 family protein.
  
     0.519
AFZ49630.1
PFAM: Glutamate-cysteine ligase family 2(GCS2); TIGRFAM: glutamate--cysteine ligase, cyanobacterial, putative; manually curated.
  
     0.510
Your Current Organism:
Dactylococcopsis salina
NCBI taxonomy Id: 13035
Other names: D. salina PCC 8305, Dactylococcopsis salina PCC 8305, Dactylococcopsis sp. PCC 8305, Myxobactron salinum PCC 8305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.