STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ51932.1Putative transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family. (339 aa)    
Predicted Functional Partners:
AFZ50510.1
Hypothetical protein.
  
     0.732
AFZ51901.1
PFAM: Protein of unknown function (DUF3120).
  
     0.718
AFZ49712.1
Hypothetical protein.
  
     0.674
AFZ50048.1
PFAM: Protein of unknown function (DUF3146).
  
     0.660
AFZ51037.1
Hypothetical protein.
  
     0.627
AFZ49967.1
PFAM: Chlorophyll A-B binding protein.
  
     0.624
AFZ50099.1
Single-stranded DNA-binding protein; PFAM: Single-strand binding protein family.
  
     0.575
AFZ49037.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.552
AFZ51915.1
Hypothetical protein.
  
     0.550
AFZ50239.1
Hypothetical protein.
  
     0.541
Your Current Organism:
Dactylococcopsis salina
NCBI taxonomy Id: 13035
Other names: D. salina PCC 8305, Dactylococcopsis salina PCC 8305, Dactylococcopsis sp. PCC 8305, Myxobactron salinum PCC 8305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.