STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ52127.1Mg chelatase, cobalamin biosynthesis protein CobN; PFAM: von Willebrand factor type A domain. (206 aa)    
Predicted Functional Partners:
AFZ50483.1
PFAM: Bacterial pre-peptidase C-terminal domain.
  
    0.771
AFZ50637.1
Hypothetical protein.
  
     0.750
AFZ51203.1
Subtilisin-like serine protease; PFAM: Subtilase family.
  
     0.737
AFZ49446.1
Hypothetical protein.
  
     0.708
ndhN
NADH-quinone oxidoreductase cyanobacterial subunit N; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
       0.701
AFZ49912.1
Hypothetical protein.
  
     0.680
AFZ50691.1
SH3 domain-containing protein; PFAM: Bacterial SH3 domain.
  
     0.675
AFZ49842.1
Parvulin-like peptidyl-prolyl isomerase; PFAM: PPIC-type PPIASE domain.
  
     0.649
AFZ51081.1
Hypothetical protein.
  
     0.639
AFZ49217.1
PFAM: Protein of unknown function (DUF3134).
  
     0.620
Your Current Organism:
Dactylococcopsis salina
NCBI taxonomy Id: 13035
Other names: D. salina PCC 8305, Dactylococcopsis salina PCC 8305, Dactylococcopsis sp. PCC 8305, Myxobactron salinum PCC 8305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.