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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU59484.1Ligand-binding protein, receptor family; KEGG: apb:SAR116_0346 1.6e-34 high affinity branched-chain amino acid amino acid ABC transporter substrate-binding protein K01999; Psort location: Periplasmic, score: 9.76. (403 aa)    
Predicted Functional Partners:
LivM
Branched-chain amino acid ABC transporter, permease protein; KEGG: apb:SAR116_0931 5.1e-38 inner-membrane translocator K01998; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.999
LivH
Putative high-affinity branched-chain amino acid ABC transporter, permease protein LivH; KEGG: cnc:CNE_2c19880 4.5e-46 cpg2; carboxypeptidase G2 K01997; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.998
LivG1
ABC transporter, ATP-binding protein; KEGG: sgg:SGGBAA2069_c17160 4.5e-110 CYSA; Sulfate/thiosulfate import ATP-binding protein cysA K01995; Psort location: Cytoplasmic, score: 9.12.
 
 
 0.983
LivF
KEGG: sgg:SGGBAA2069_c17150 3.2e-100 livF; branched-chain amino acid transport system ATP-binding protein K01996; Psort location: Cytoplasmic, score: 9.12.
 
 
 0.975
KXU59479.1
CBS domain protein; KEGG: sgo:SGO_1625 1.1e-69 acetoin utilization putative/CBS domain-containing protein K04767; Psort location: Cytoplasmic, score: 8.96.
 
     0.715
KXU59485.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.566
KXU59486.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.566
clpP
Endopeptidase Clp; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
  
   0.521
rpmE2
Ribosomal protein L31; KEGG: apb:SAR116_2278 3.5e-07 50S ribosomal protein L31 K02909.
  
    0.508
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
    0.444
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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