STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DnaIPrimosomal protein DnaI; Psort location: Cytoplasmic, score: 8.96. (300 aa)    
Predicted Functional Partners:
KXU59523.1
KEGG: stj:SALIVA_0297 4.3e-192 dnaB; chromosome replication initiation / membrane attachment protein DnaB; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.920
HolB
KEGG: stf:Ssal_00028 1.6e-224 dnaB; replicative DNA helicase; K02314 replicative DNA helicase; Psort location: Cytoplasmic, score: 9.97.
  
 0.918
KXU57664.1
Phage/plasmid primase, P4 family domain protein; KEGG: llr:llh_11425 9.4e-62 putative Dna Primase K06919; Psort location: Cytoplasmic, score: 8.96.
  
 0.902
DnaG
DNA primase; KEGG: stf:Ssal_00588 0. dnaG; DNA primase; K02316 DNA primase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.842
NrdR
Transcriptional regulator NrdR; KEGG: scp:HMPREF0833_11054 2.3e-58 iro; iron oxidase K07738; Psort location: Cytoplasmic, score: 9.97.
       0.800
RecU
Recombination protein U; KEGG: ssr:SALIVB_0254 1.7e-101 recU; holliday junction resolvase recU K03700.
 
   
 0.792
EzrA
Septation ring formation regulator EzrA; KEGG: tva:TVAG_387410 4.5e-09 viral A-type inclusion protein; K02331 DNA polymerase phi subunit; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.711
DnaN
KEGG: ssr:SALIVB_0002 1.2e-185 dnaN; beta subunit of DNA polymerase III; K02338 DNA polymerase III subunit beta; Psort location: Cytoplasmic, score: 9.26.
 
 
 0.674
KXU56066.1
DnaD domain protein; KEGG: ssr:SALIVB_1214 1.8e-113 tpiA; triosephosphate isomerase K02086; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.667
KXU59475.1
KEGG: stj:SALIVA_0343 3.9e-198 comFA; comF operon protein 1 (ATP-dependent helicase comFA); Psort location: Cytoplasmic, score: 9.97.
  
     0.631
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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