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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU59439.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82. (96 aa)    
Predicted Functional Partners:
KXU59440.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.773
KXU59438.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.737
KXU59434.1
KEGG: ssr:SALIVB_0177 5.5e-121 rsmE; ribosomal RNA small subunit methyltransferase E K09761; Psort location: Cytoplasmic, score: 8.96.
       0.465
prmA
Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.
       0.465
KXU59436.1
Hydrolase, NUDIX family; KEGG: ste:STER_0195 2.6e-66 ADP-ribose pyrophosphatase; K03574 7,8-dihydro-8-oxoguanine triphosphatase; Psort location: Cytoplasmic, score: 8.96.
       0.465
KXU59437.1
Hypothetical protein.
       0.465
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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