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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU59353.1DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 8.96. (410 aa)    
Predicted Functional Partners:
KXU59347.1
Conjugal transfer protein; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.959
KXU59354.1
FtsK/SpoIIIE family protein; KEGG: ppo:PPM_p0073 4.4e-07 topB; DNA topoisomerase III; Psort location: CytoplasmicMembrane, score: 7.88.
 
  
 0.901
KXU59348.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
    0.864
KXU59350.1
Hypothetical protein.
  
    0.828
KXU59002.1
Replication initiation factor; Psort location: Cytoplasmic, score: 8.96.
 
     0.778
KXU58900.1
Hypothetical protein.
 
     0.774
KXU59351.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.751
KXU59349.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.746
KXU59352.1
Hypothetical protein.
       0.746
KXU58195.1
Replication initiation factor; Psort location: Cytoplasmic, score: 8.96.
 
     0.741
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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