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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU59309.1Hypothetical protein; KEGG: sgg:SGGBAA2069_c13330 1.8e-33 yndA; putative GCN5-related N-acetyltransferase. (178 aa)    
Predicted Functional Partners:
KXU59310.1
KEGG: aur:HMPREF9243_0771 3.7e-90 gtfB; accessory Sec system glycosyltransferase GtfB.
   
   0.790
KXU59311.1
KEGG: suz:MS7_2653 3.7e-154 gtfA; accessory Sec system glycosylation protein GtfA; Psort location: Cytoplasmic, score: 8.96.
   
   0.790
thiI
Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
       0.588
NifS2
Aminotransferase, class V; KEGG: stf:Ssal_01786 3.9e-191 iscS; cysteine desulfurase; K04487 cysteine desulfurase; Psort location: Cytoplasmic, score: 9.97.
       0.513
rplU
Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
       0.487
rpmA
Ribosomal protein L27; KEGG: pfe:PSF113_5049 6.8e-20 50S ribosomal protein L27 K02899; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL27 family.
       0.423
KXU56966.1
Matrixin; KEGG: sgg:SGGBAA2069_c08380 2.8e-24 Zn-dependent protease; Psort location: Extracellular, score: 9.65.
 
     0.409
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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