Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXU59339.123S rRNA (uracil-5-)-methyltransferase RumA; KEGG: stj:SALIVA_0357 3.4e-215 tRNA methyltransferase, TrmA family; Psort location: Cytoplasmic, score: 9.97. (452 aa)    
Predicted Functional Partners:
KXU59340.1
Regulatory protein RecX; KEGG: erh:ERH_0631 1.9e-11 bifunctional group 1 glycosyl transferase/recombination regulator RecX; K03429 1,2-diacylglycerol 3-glucosyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
    0.775
KXU59341.1
Hypothetical protein; KEGG: mpu:MYPU_1770 8.2e-22 cysS; cysteinyl-tRNA synthetase (cysteine--tRNA ligase) K01883; Psort location: Cytoplasmic, score: 9.97; Belongs to the UPF0374 family.
       0.702
KXU56696.1
Hypothetical protein; KEGG: stf:Ssal_01518 2.6e-192 rlmI; methyltransferase; K06969 23S rRNA (cytosine1962-C5)-methyltransferase; Psort location: Cytoplasmic, score: 9.26.
  
  
 0.586
KXU59586.1
Hypothetical protein; KEGG: ssr:SALIVB_0257 2.3e-202 methyltransferase K07444; Psort location: Cytoplasmic, score: 9.97; Belongs to the methyltransferase superfamily.
   
  
 0.582
AsnA
Aspartate--ammonia ligase; KEGG: stj:SALIVA_0358 5.5e-176 asnA; aspartate--ammonia ligase (Asparagine synthetase A); Psort location: Cytoplasmic, score: 10.00.
       0.530
NrdI
Putative nrdI protein; KEGG: sds:SDEG_0228 1.4e-58 nrdI; flavoprotein NrdI K03647.
       0.509
PheT
KEGG: stf:Ssal_00892 0. pheT; phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.419
KXU58932.1
Alanine racemase; KEGG: ssr:SALIVB_1851 1.4e-179 alr; alanine racemase K01775; Psort location: Cytoplasmic, score: 9.97.
 
     0.411
KXU57942.1
S-adenosylmethionine-dependent methyltransferase, YraL family; KEGG: ssr:SALIVB_1594 7.3e-142 hypothetical protein; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.409
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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