STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU59260.1KEGG: stf:Ssal_00078 1.1e-56 low molecular weight protein-tyrosine-phosphatase yfkj; K01104 protein-tyrosine phosphatase. (127 aa)    
Predicted Functional Partners:
KXU59259.1
MORN repeat protein; KEGG: tet:TTHERM_00637110 3.4e-11 Protein kinase domain containing protein.
  
    0.806
KXU59258.1
Acyltransferase; KEGG: stj:SALIVA_1991 0. oatA; O-acetyltransferase oatA; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.802
KXU58947.1
Putative bacteriocin transport accessory protein; KEGG: sgg:SGGBAA2069_c19780 3.2e-36 blpT; putative immunity/modification protein.
  
 
 0.731
trxA
Thioredoxin; KEGG: soz:Spy49_1432c 1.4e-42 trx2; thioredoxin reductase K03671; Psort location: Cytoplasmic, score: 9.26; Belongs to the thioredoxin family.
  
 
 0.731
KXU58487.1
Hypothetical protein; KEGG: mct:MCR_1663 2.3e-10 phage shock protein E K03972.
  
 
 0.629
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
   0.626
KXU56434.1
KEGG: stf:Ssal_02051 1.2e-125 truA; tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase; Psort location: Cytoplasmic, score: 8.96.
   
   0.620
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
   
   0.615
rsmH
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
    
   0.612
ruvB
Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
       0.608
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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