STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU59268.1Hypothetical protein; KEGG: say:TPY_3350 6.6e-05 ruvX; Holliday junction resolvase; K07447 putative holliday junction resolvase; Belongs to the UPF0473 family. (101 aa)    
Predicted Functional Partners:
KXU59267.1
RNAse H domain protein, YqgF family; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
  
    0.844
KXU59266.1
Hypothetical protein; Belongs to the UPF0297 family.
  
  
 0.791
EzrA
Septation ring formation regulator EzrA; KEGG: tva:TVAG_387410 4.5e-09 viral A-type inclusion protein; K02331 DNA polymerase phi subunit; Psort location: Cytoplasmic, score: 8.96.
  
     0.735
rpoE
DNA-directed RNA polymerase, delta subunit; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family.
  
     0.732
KXU57236.1
Hypothetical protein; KEGG: mru:mru_1319 1.0e-07 DEAD/DEAH box helicase domain-containing protein; K03725 archaea-specific helicase; Psort location: Cytoplasmic, score: 8.96.
  
     0.716
KXU59527.1
Putative ACR.
  
     0.714
KXU59134.1
Bacterial ABC transporter protein EcsB; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.698
KXU57700.1
Cell division protein FtsQ; KEGG: nfi:NFIA_008440 0.0013 DEAD/DEAH box helicase, putative; K14807 ATP-dependent RNA helicase DDX51/DBP6.
  
     0.676
KXU59495.1
Polysaccharide biosynthesis protein; KEGG: ssr:SALIVB_0347 1.1e-273 cystathionine gamma-synthase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.628
MecA
Negative regulator of genetic competence; Psort location: Cytoplasmic, score: 9.97.
  
     0.616
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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