STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU59191.1DNA-binding helix-turn-helix protein. (65 aa)    
Predicted Functional Partners:
KXU59189.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.774
KXU59190.1
Hypothetical protein; KEGG: cbt:CLH_2605 0.00061 ATP-dependent helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 9.94.
  
    0.774
KXU59192.1
DNA-binding helix-turn-helix protein; KEGG: sgg:SGGBAA2069_c10720 7.2e-08 transcriptional regulator.
       0.773
KXU59188.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.451
KXU59184.1
Hypothetical protein.
       0.421
KXU59185.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.421
KXU59186.1
ImpB/MucB/SamB family protein; KEGG: ssr:SALIVB_0903 2.6e-192 dinB2; DNA polymerase IV 2 (Pol IV 2) K03502; Psort location: Cytoplasmic, score: 9.26.
       0.421
KXU59187.1
Peptidase S24-like protein; KEGG: sgg:SGGBAA2069_c10720 5.0e-56 transcriptional regulator; Psort location: Cytoplasmic, score: 8.96.
       0.421
KXU56619.1
Zeta toxin; Psort location: Cytoplasmic, score: 8.96.
    
   0.400
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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