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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU59019.1Hypothetical protein; KEGG: ctp:CTRG_05827 9.7e-07 hypothetical protein; K01183 chitinase; Psort location: Extracellular, score: 9.64. (142 aa)    
Predicted Functional Partners:
KXU59018.1
Hypothetical protein; KEGG: mps:MPTP_1731 0.0051 foldase PrsA, clustered with pyrimidine conversion K07533.
       0.768
MraY
KEGG: stj:SALIVA_1757 1.3e-176 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.507
Pbp2X
KEGG: ssr:SALIVB_1810 0. pbp2X; penicillin-binding protein 2X K12556; Psort location: CytoplasmicMembrane, score: 9.82.
       0.507
KXU59016.1
Cell division protein FtsL.
       0.507
rsmH
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
       0.507
KXU59020.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.484
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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