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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU58916.1ABC transporter, ATP-binding protein; KEGG: lsp:Bsph_1357 9.7e-28 potA; spermidine/putrescine import ATP-binding protein; K11072 spermidine/putrescine transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88. (261 aa)    
Predicted Functional Partners:
PknB
KEGG: stj:SALIVA_1500 0. pknB; putative serine/threonine-protein kinase pknB; Psort location: CytoplasmicMembrane, score: 7.88.
  
 
 0.999
DnaK2
DnaK family protein; KEGG: ctx:Clo1313_0933 3.1e-63 chaperone protein DnaK K04043; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.916
KXU59600.1
ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.873
KXU57520.1
ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.867
KXU57538.1
ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.867
KXU57921.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
  0.860
AcoL2
Dihydrolipoyl dehydrogenase; KEGG: stj:SALIVA_1069 3.7e-257 adhD; putative dihydrolipoamide dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.845
KXU59420.1
ABC transporter, permease protein; KEGG: clo:HMPREF0868_1418 3.7e-51 ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein K02029; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
  0.829
KXU58116.1
Lysine-arginine-ornithine-binding periplasmic protein; KEGG: ssr:SALIVB_0520 0. glnP; glutamine ABC transporter permease and substrate binding protein K02029:K02030; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
  0.829
potA
Putative spermidine/putrescine ABC transporter, ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
  
 
 
0.829
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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