STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU58943.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (129 aa)    
Predicted Functional Partners:
NusB
Transcription antitermination factor NusB; KEGG: tte:TTE1503 6.9e-08 Sun; tRNA and rRNA cytosine-C5-methylase; K03500 16S rRNA (cytosine967-C5)-methyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
    0.867
efp
Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
  
    0.672
Asp
Hypothetical protein.
  
   
 0.655
KXU58471.1
Helix-turn-helix protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.
 
     0.650
KXU59266.1
Hypothetical protein; Belongs to the UPF0297 family.
 
    0.632
KXU59495.1
Polysaccharide biosynthesis protein; KEGG: ssr:SALIVB_0347 1.1e-273 cystathionine gamma-synthase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.605
CodY
GTP-sensing transcriptional pleiotropic repressor CodY; Psort location: Cytoplasmic, score: 9.97.
  
     0.584
PepP
Putative Xaa-Pro dipeptidase; KEGG: stf:Ssal_00280 2.2e-181 pepP; Xaa-Pro aminopeptidase; K01262 Xaa-Pro aminopeptidase; Psort location: Cytoplasmic, score: 9.97.
 
     0.565
KXU58281.1
DAK2 domain fusion protein YloV; KEGG: efu:HMPREF0351_10092 1.8e-186 dhaK; glycerone kinase K07030.
 
  
 0.558
KXU57605.1
DNA repair protein RecO; KEGG: lec:LGMK_02530 4.7e-31 L-asparaginase; K01424 L-asparaginase; Psort location: Cytoplasmic, score: 8.96.
  
     0.535
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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