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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MutYKEGG: stj:SALIVA_1827 1.0e-197 mutY; A/G-specific adenine glycosylase; Psort location: Cytoplasmic, score: 9.97. (383 aa)    
Predicted Functional Partners:
xth
Exodeoxyribonuclease III; KEGG: stj:SALIVA_1604 1.8e-147 exoA; exodeoxyribonuclease; Psort location: Cytoplasmic, score: 9.97.
    
 0.854
DnaN
KEGG: ssr:SALIVB_0002 1.2e-185 dnaN; beta subunit of DNA polymerase III; K02338 DNA polymerase III subunit beta; Psort location: Cytoplasmic, score: 9.26.
   
 
 0.612
uvrA
Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
     
 0.559
KXU57556.1
KEGG: stf:Ssal_00827 5.5e-160 msrAB; methionine-R-sulfoxide reductase; K12267 peptide methionine sulfoxide reductase msrA/msrB; Psort location: Cytoplasmic, score: 9.97.
     
 0.535
BirA
biotin--[acetyl-CoA-carboxylase] ligase; KEGG: stj:SALIVA_0965 1.5e-159 birA; bifunctional biotin operon repressor/biotin--[acetyl-CoA-carboxylase] synthetase; Psort location: Cytoplasmic, score: 9.26.
  
  
 0.526
fhs
KEGG: stf:Ssal_00941 1.3e-291 fhs; formate--tetrahydrofolate ligase; K01938 formate--tetrahydrofolate ligase; Psort location: Cytoplasmic, score: 8.96.
     
 0.492
CopZ
Heavy metal-associated domain protein; KEGG: apr:Apre_0987 7.7e-07 heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase.
      
 0.471
GapN
KEGG: stj:SALIVA_0805 4.3e-240 gapN; NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase) (glyceraldehyde-3-phosphate dehydrogenase [NADP+]) (triosephosphate dehydrogenase); Psort location: Cytoplasmic, score: 9.97.
  
  
 0.456
MutL
KEGG: btk:BT9727_3509 5.6e-151 mutL; DNA mismatch repair protein K03572; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.431
Nth1
Endonuclease III; KEGG: stf:Ssal_01295 1.2e-109 nth; endonuclease III; K10773 endonuclease III; Psort location: Cytoplasmic, score: 9.97.
 
  
0.423
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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