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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RnhB2Ribonuclease HIII; KEGG: stj:SALIVA_1835 6.6e-148 rnhC; ribonuclease HIII (RNase HIII). (296 aa)    
Predicted Functional Partners:
RnhB1
Ribonuclease HII; KEGG: stj:SALIVA_1185 7.1e-128 ribonuclease HII (RNase HII); Psort location: Cytoplasmic, score: 9.97.
    
 0.845
SipA
Signal peptidase I; KEGG: stj:SALIVA_1836 5.1e-109 sipA; signal peptidase I; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.765
RecD
Helicase, RecD/TraA family; KEGG: ssr:SALIVB_1902 0. recD; putative exodeoxyribonuclease V K03581; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.726
RecU
Recombination protein U; KEGG: ssr:SALIVB_0254 1.7e-101 recU; holliday junction resolvase recU K03700.
  
   
 0.660
KXU58963.1
CvpA family protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.577
KXU56164.1
Adenylate cyclase; KEGG: sgg:SGGBAA2069_c09900 2.6e-57 adenylate cyclase; Psort location: Cytoplasmic, score: 8.96.
  
     0.503
EzrA
Septation ring formation regulator EzrA; KEGG: tva:TVAG_387410 4.5e-09 viral A-type inclusion protein; K02331 DNA polymerase phi subunit; Psort location: Cytoplasmic, score: 8.96.
  
    0.489
KXU58964.1
Hypothetical protein; KEGG: stz:SPYALAB49_001553 6.2e-26 seryl-tRNA synthetase.
       0.464
KXU57798.1
Hypothetical protein.
  
     0.454
KXU59298.1
KEGG: stj:SALIVA_0403 2.3e-186 nadR; putative nicotinamide-nucleotide adenylyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
   
 0.442
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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