STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU58996.1Macro domain protein; KEGG: fbr:FBFL15_1840 1.2e-31 putative bifunctional YmdB hypothetical protein/putative ADP-ribosylglycohydrolase; K05521 ADP-ribosylglycohydrolase; Psort location: Cytoplasmic, score: 8.96. (260 aa)    
Predicted Functional Partners:
cmk
Cytidylate kinase; KEGG: stj:SALIVA_1013 5.0e-111 cmk; cytidylate kinase (CK) (Cytidine monophosphate kinase) (CMP kinase); Psort location: Cytoplasmic, score: 9.97.
 
      0.610
trxA
Thioredoxin; KEGG: soz:Spy49_1432c 1.4e-42 trx2; thioredoxin reductase K03671; Psort location: Cytoplasmic, score: 9.26; Belongs to the thioredoxin family.
       0.509
KXU58498.1
ABC transporter, substrate-binding protein, QAT family; KEGG: stj:SALIVA_1161 1.2e-228 glycine betaine/L-proline ABC transporter,permease/glycine betaine/L-proline-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.435
KXU58994.1
KEGG: apb:SAR116_0300 3.2e-22 CoA-binding domain-containing protein K06929; Psort location: Cytoplasmic, score: 8.96.
       0.402
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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