STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrxB1BKEGG: stu:STH8232_0111 7.0e-263 alkyl hydroperoxide reductase subunit F; K03387 alkyl hydroperoxide reductase subunit F; Psort location: CytoplasmicMembrane, score: 7.88. (510 aa)    
Predicted Functional Partners:
KXU58832.1
Peroxiredoxin; KEGG: stf:Ssal_02101 1.9e-102 prdX; peroxiredoxin; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C); Psort location: Cytoplasmic, score: 9.97.
 
 
 0.995
rpsB
Ribosomal protein S2; KEGG: apb:SAR116_0519 9.7e-60 30S ribosomal protein S2 K02967; Psort location: Cytoplasmic, score: 9.97; Belongs to the universal ribosomal protein uS2 family.
       0.517
KXU56464.1
Ferritin-like protein; KEGG: ssr:SALIVB_1308 1.2e-77 dps; DNA protection during starvation protein K04047; Psort location: Cytoplasmic, score: 9.26.
  
  
 0.490
sodA
Superoxide dismutase, Mn; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
  
  
 0.469
KXU57556.1
KEGG: stf:Ssal_00827 5.5e-160 msrAB; methionine-R-sulfoxide reductase; K12267 peptide methionine sulfoxide reductase msrA/msrB; Psort location: Cytoplasmic, score: 9.97.
     
 0.400
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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