STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU58851.1EDD domain protein, DegV family; KEGG: mgf:MGF_3873 2.5e-07 DegV-like protein; Psort location: Cytoplasmic, score: 8.96. (286 aa)    
Predicted Functional Partners:
KXU58281.1
DAK2 domain fusion protein YloV; KEGG: efu:HMPREF0351_10092 1.8e-186 dhaK; glycerone kinase K07030.
   0.961
TrmH
RNA methyltransferase, TrmH family, group 3; KEGG: stj:SALIVA_0109 2.5e-125 trmH; putative trmH family tRNA/rRNA methyltransferase yacO; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
  
    0.800
KXU58850.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.795
Asp
Hypothetical protein.
 
    0.661
KXU58848.1
Hypothetical protein; KEGG: spo:SPAPB1E7.04c 6.7e-10 chitinase (predicted) K01183.
       0.619
KXU58852.1
KEGG: bmy:Bm1_14645 0.0014 hypothetical protein; K10615 E3 ubiquitin-protein ligase HERC4.
       0.613
rplM
Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
       0.455
rpsI
Ribosomal protein S9; KEGG: apb:SAR116_0492 6.0e-28 30S ribosomal protein S9 K02996; Psort location: Cytoplasmic, score: 9.26; Belongs to the universal ribosomal protein uS9 family.
       0.425
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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