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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU58852.1KEGG: bmy:Bm1_14645 0.0014 hypothetical protein; K10615 E3 ubiquitin-protein ligase HERC4. (292 aa)    
Predicted Functional Partners:
KXU57534.1
DnaJ domain protein.
   
 0.838
groL
Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
    
 0.799
KXU56112.1
KEGG: stj:SALIVA_1471 1.7e-204 sbcD; exonuclease; Psort location: Cytoplasmic, score: 9.97.
   
 
  0.787
KXU58916.1
ABC transporter, ATP-binding protein; KEGG: lsp:Bsph_1357 9.7e-28 potA; spermidine/putrescine import ATP-binding protein; K11072 spermidine/putrescine transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
  
 0.719
KXU56980.1
Replication protein.
   
 0.644
alaS
alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 
  0.640
TrmH
RNA methyltransferase, TrmH family, group 3; KEGG: stj:SALIVA_0109 2.5e-125 trmH; putative trmH family tRNA/rRNA methyltransferase yacO; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
   
   0.627
KXU58851.1
EDD domain protein, DegV family; KEGG: mgf:MGF_3873 2.5e-07 DegV-like protein; Psort location: Cytoplasmic, score: 8.96.
       0.613
KXU58850.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.608
KXU59584.1
KEGG: ssr:SALIVB_0259 0. Snf2 family protein; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.524
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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