STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU58855.1Site-specific recombinase, phage integrase family; KEGG: ssr:SALIVB_2111 6.4e-05 DNA polymerase III subunit beta. (402 aa)    
Predicted Functional Partners:
KXU58856.1
DNA binding domain, excisionase family.
 
     0.920
KXU58857.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.495
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
  
  
 0.495
KXU59353.1
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.461
KXU58195.1
Replication initiation factor; Psort location: Cytoplasmic, score: 8.96.
 
     0.457
KXU59002.1
Replication initiation factor; Psort location: Cytoplasmic, score: 8.96.
 
     0.448
KXU59474.1
comF family protein; KEGG: bya:BANAU_3449 6.3e-17 comFC; competence protein ComFC K02242; Psort location: Cytoplasmic, score: 8.96.
   
    0.442
KXU58858.1
CHAP domain protein; KEGG: slg:SLGD_00102 2.4e-33 N-acetylmuramoyl-L-alanine amidase.
       0.401
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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