close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU58427.1Methyltransferase small domain protein; KEGG: ssr:SALIVB_0864 1.7e-92 16S rRNA m(2)G 1207 methyltransferase K00564; Psort location: Cytoplasmic, score: 8.96. (196 aa)    
Predicted Functional Partners:
KXU58428.1
KEGG: stf:Ssal_00947 1.2e-198 pdp; pyrimidine-nucleoside phosphorylase; K00756 pyrimidine-nucleoside phosphorylase; Psort location: Cytoplasmic, score: 8.96.
       0.800
KXU58429.1
KEGG: stf:Ssal_00948 1.8e-99 deoC; deoxyribose-phosphate aldolase; K01619 deoxyribose-phosphate aldolase; Psort location: Cytoplasmic, score: 9.26.
       0.702
KXU58430.1
Cytidine deaminase; KEGG: ssr:SALIVB_0867 1.1e-58 cdd; cytidine deaminase K01489.
       0.702
KXU58426.1
Pantothenate kinase; KEGG: stj:SALIVA_1237 9.4e-149 coaA; pantothenate kinase (Pantothenic acid kinase); Psort location: Cytoplasmic, score: 8.96.
       0.601
KXU58431.1
Basic membrane protein; KEGG: apb:SAR116_1606 2.5e-36 membrane lipoprotein K07335.
       0.568
obgE
Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
   
    0.546
rplA
Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
  
    0.518
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
    0.509
rpsT
Ribosomal protein S20; Binds directly to 16S ribosomal RNA.
       0.502
nusA
Transcription termination factor NusA; Participates in both transcription termination and antitermination.
  
    0.454
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.