STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU58505.1Hypothetical protein; KEGG: hip:CGSHiEE_06685 0.0029 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K03811; Psort location: CytoplasmicMembrane, score: 9.82. (68 aa)    
Predicted Functional Partners:
KXU59298.1
KEGG: stj:SALIVA_0403 2.3e-186 nadR; putative nicotinamide-nucleotide adenylyltransferase; Psort location: Cytoplasmic, score: 8.96.
     
 0.585
KXU58504.1
IS1216, transposase family protein; KEGG: cdb:CDBH8_0567 1.7e-30 pol; Pol polyprotein.
       0.520
RecJ
KEGG: stf:Ssal_01299 0. recJ; single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease; Psort location: Cytoplasmic, score: 9.97.
   
  
 0.413
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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