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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HipO3Amidohydrolase; Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate. (377 aa)    
Predicted Functional Partners:
KXU59538.1
Peptidase dimerization domain protein; KEGG: stf:Ssal_01888 1.2e-237 dapE; acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase; Psort location: Cytoplasmic, score: 9.97.
    
  0.903
AraT
Aromatic-amino-acid transaminase; KEGG: ssr:SALIVB_0038 5.4e-201 araT; aromatic amino acid aminotransferase; K00841 aminotransferase; Psort location: Cytoplasmic, score: 9.97.
    
  0.902
dapD
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate.
 
  
 0.888
KXU58323.1
Peptidase, S54 family; KEGG: stl:stu1836 6.1e-106 hypothetical protein; K01362; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.640
KXU58322.1
KEGG: stf:Ssal_00173 1.1e-81 5-formyltetrahydrofolate cyclo-ligase; K01934 5-formyltetrahydrofolate cyclo-ligase; Psort location: Cytoplasmic, score: 8.96.
  
    0.639
KXU58319.1
HAD hydrolase, family IA, variant 3; KEGG: sgg:SGGBAA2069_c15500 1.4e-53 haloacid dehalogenase-like hydrolase K07025; Psort location: Cytoplasmic, score: 8.96.
       0.432
DapB
KEGG: stf:Ssal_01774 1.1e-127 dapB; dihydrodipicolinate reductase; K00215 dihydrodipicolinate reductase; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.412
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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