STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU58259.1r3H domain protein; KEGG: sgg:SGGBAA2069_c20720 1.5e-84 jag; Jag family RNA-binding protein K06346; Psort location: Cytoplasmic, score: 8.96. (348 aa)    
Predicted Functional Partners:
KXU56961.1
KH domain protein; Psort location: Cytoplasmic, score: 8.96; Belongs to the UPF0109 family.
  
 
 0.965
KXU58258.1
Membrane protein insertase, YidC/Oxa1 family; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.908
KXU58257.1
KEGG: stj:SALIVA_1879 1.3e-50 rnpA; ribonuclease P protein component (RNaseP protein) (RNase P protein) (Protein C5); Psort location: Cytoplasmic, score: 9.26.
 
    0.813
KXU59578.1
Membrane protein insertase, YidC/Oxa1 family; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.638
rsmG
16S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.618
KXU59561.1
Hypothetical protein; KEGG: pmj:P9211_04091 1.3e-16 ribonuclease P K08998.
  
    0.553
KXU56654.1
KEGG: stf:Ssal_01442 9.7e-131 lgt; prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.522
rpmH
Ribosomal protein L34; KEGG: mmn:midi_01062 4.8e-10 rpmH; 50S ribosomal protein L34P K02914; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bL34 family.
     
 0.508
KXU58261.1
Flavodoxin-like protein; KEGG: ssr:SALIVB_1940 1.1e-81 NQO2; ribosyldihydronicotinamide dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
       0.505
KXU58260.1
Transcriptional regulator, TetR family; Psort location: Cytoplasmic, score: 8.96.
       0.489
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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