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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU58085.1Radical SAM protein family; KEGG: ssr:SALIVB_1764 2.3e-168 Fe-S oxidoreductase K07139; Psort location: Cytoplasmic, score: 8.96. (314 aa)    
Predicted Functional Partners:
KXU58084.1
Putative rRNA methylase; KEGG: ssr:SALIVB_1763 4.4e-87 SAM-dependent methyltransferase K00614.
 
     0.826
KXU58082.1
Transporter, CPA2 family; KEGG: tgo:TGME49_105180 4.4e-15 sodium/hydrogen exchanger, putative; Psort location: CytoplasmicMembrane, score: 10.00.
       0.800
KXU58083.1
Hypothetical protein; KEGG: fin:KQS_12770 0.0056 atpF; ATP synthase subunit B K02109.
       0.787
CoaD
KEGG: stc:str1648 1.6e-82 coaD; phosphopantetheine adenylyltransferase K00954; Psort location: Cytoplasmic, score: 9.97.
       0.576
KXU58086.1
PDZ domain protein; KEGG: stj:SALIVA_1716 8.7e-178 lon; ATP-dependent protease La.
       0.557
rsmD
RNA methyltransferase, RsmD family; KEGG: ssr:SALIVB_1767 7.2e-87 phosphopantetheine adenylyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.512
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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