STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU58017.1Hydrolase, NUDIX family; KEGG: stj:SALIVA_0614 9.7e-76 putative mutator protein (7,8-dihydro-8-oxoguanine-triphosphatase). (152 aa)    
Predicted Functional Partners:
KXU58018.1
Hypothetical protein.
 
     0.908
Rnr
KEGG: stj:SALIVA_0636 0. rnr1; exoribonuclease R; Psort location: Cytoplasmic, score: 9.97.
   
 0.661
BirA
biotin--[acetyl-CoA-carboxylase] ligase; KEGG: stj:SALIVA_0965 1.5e-159 birA; bifunctional biotin operon repressor/biotin--[acetyl-CoA-carboxylase] synthetase; Psort location: Cytoplasmic, score: 9.26.
  
    0.627
cshB
Putative DEAD-box ATP-dependent RNA helicase CshB; Probable DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures.
  
 0.620
DeaD
DEAD/DEAH box helicase; KEGG: sgg:SGGBAA2069_c07220 1.0e-144 ATP-dependent RNA helicase DBP2; Psort location: Cytoplasmic, score: 9.97.
  
 0.620
cshA
DEAD/DEAH box helicase; DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA-dependent ATPase activity; Belongs to the DEAD box helicase family. CshA subfamily.
  
 0.620
Rnc
Ribonuclease III; KEGG: stf:Ssal_00886 1.3e-119 rnc; ribonuclease III; K03685 ribonuclease III; Psort location: Cytoplasmic, score: 9.97.
    
 0.580
KXU58963.1
CvpA family protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.575
KXU56188.1
Hypothetical protein.
  
     0.533
KXU59441.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.529
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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