STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU58033.1Hypothetical protein; KEGG: ssv:SSU98_0443 2.0e-27 galactose mutarotase-like protein; K01785 aldose 1-epimerase. (84 aa)    
Predicted Functional Partners:
KXU58032.1
Hypothetical protein; KEGG: opr:Ocepr_1600 0.00042 DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha.
       0.622
KXU58034.1
Putative homocysteine S-methyltransferase; KEGG: stl:stu0584 1.3e-151 mmuM; homocysteine methyltransferase K00547; Psort location: Cytoplasmic, score: 9.97.
       0.522
RocE2
Putative lysine-specific permease; KEGG: eab:ECABU_c01170 9.5e-69 aroP; aromatic amino acid transport protein AroP K11734; Psort location: CytoplasmicMembrane, score: 10.00.
       0.522
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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