STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AtpBKEGG: stj:SALIVA_0463 5.6e-119 atpB; ATP synthase subunit A; Psort location: CytoplasmicMembrane, score: 10.00. (235 aa)    
Predicted Functional Partners:
AtpC
KEGG: ssr:SALIVB_1605 6.9e-66 atpC; ATP synthase subunit epsilon K02114; Psort location: Cytoplasmic, score: 9.12.
 
 0.999
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
 
 0.999
AtpG
KEGG: stj:SALIVA_0467 3.2e-148 atpG; ATP synthase gamma chain (ATP synthase F1 sector gamma subunit); Psort location: Cytoplasmic, score: 9.12.
 
 0.999
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
 
 0.999
AtpH
KEGG: ssr:SALIVB_1609 1.5e-84 atpH; ATP synthase subunit delta K02113; Psort location: Cytoplasmic, score: 9.97.
 
 0.999
AtpF
KEGG: stj:SALIVA_0464 2.8e-78 atpF; ATP synthase subunit B; Psort location: CytoplasmicMembrane, score: 9.82.
 
 0.999
AtpE
ATP synthase subunit C; KEGG: stj:SALIVA_0462 5.4e-27 atpE; ATP synthase C chain (lipid-binding protein); Psort location: CytoplasmicMembrane, score: 9.82.
  
 0.999
rpsB
Ribosomal protein S2; KEGG: apb:SAR116_0519 9.7e-60 30S ribosomal protein S2 K02967; Psort location: Cytoplasmic, score: 9.97; Belongs to the universal ribosomal protein uS2 family.
  
 
 0.818
rpsH
Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.
 
  
 0.794
tsf
Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
  
  
 0.779
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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