STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU57677.1Dinuclear metal center protein, YbgI family; KEGG: hip:CGSHiEE_02770 2.7e-10 seryl-tRNA synthetase; Psort location: Cytoplasmic, score: 8.96. (262 aa)    
Predicted Functional Partners:
KXU57676.1
Hypothetical protein; KEGG: ssr:SALIVB_1265 4.3e-105 hypothetical protein; K06967 tRNA (adenine22-N1)-methyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
 0.968
KXU57678.1
Metal cation transporter, ZIP family; KEGG: smm:Smp_146170 6.4e-33 DNA polymerase epsilon catalytic subunit; K02324 DNA polymerase epsilon subunit 1; Psort location: CytoplasmicMembrane, score: 10.00.
       0.777
KXU57679.1
FAD dependent oxidoreductase; KEGG: ssr:SALIVB_1261 3.7e-177 yurR; oxidoreductase yurR; Psort location: Cytoplasmic, score: 8.96.
       0.612
rfbB
KEGG: ssr:SALIVB_1257 2.7e-190 rmlB; dTDP-glucose 4,6-dehydratase K01710; Psort location: Cytoplasmic, score: 9.97; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
    0.592
KXU57675.1
Site-specific recombinase, phage integrase family; KEGG: stj:SALIVA_2030 1.5e-47 DNA polymerase III subunit beta.
 
    0.561
KXU58584.1
KEGG: ssr:SALIVB_0817 1.3e-188 GntR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
  
    0.487
pepT
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
  
    0.458
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
       0.422
RmlC
KEGG: ssr:SALIVB_1258 1.9e-102 rfbC; putative dTDP-4-dehydrorhamnose 3,5-epimerase K01790; Psort location: Cytoplasmic, score: 8.96.
       0.422
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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