STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DnaAReplication initiator protein DnaA; KEGG: pfe:PSF113_0001 1.5e-73 dnaA; ATPase DnaA K02313; Psort location: Cytoplasmic, score: 9.94. (454 aa)    
Predicted Functional Partners:
DnaN
KEGG: ssr:SALIVB_0002 1.2e-185 dnaN; beta subunit of DNA polymerase III; K02338 DNA polymerase III subunit beta; Psort location: Cytoplasmic, score: 9.26.
 
 0.995
HolB
KEGG: stf:Ssal_00028 1.6e-224 dnaB; replicative DNA helicase; K02314 replicative DNA helicase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.849
KXU57746.1
DNA replication and repair protein RecF; KEGG: pen:PSEEN0003 3.8e-26 recF; recombination protein F K03629; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.784
KXU57622.1
Stage 0 sporulation protein J domain protein; KEGG: pub:SAR11_0354 4.3e-25 parB; chromosome partitioning protein K03497; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.736
KXU57664.1
Phage/plasmid primase, P4 family domain protein; KEGG: llr:llh_11425 9.4e-62 putative Dna Primase K06919; Psort location: Cytoplasmic, score: 8.96.
   
 0.723
KXU57943.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
    
 
 0.660
KXU58257.1
KEGG: stj:SALIVA_1879 1.3e-50 rnpA; ribonuclease P protein component (RNaseP protein) (RNase P protein) (Protein C5); Psort location: Cytoplasmic, score: 9.26.
  
  
 0.652
KXU56088.1
KEGG: stj:SALIVA_0890 0. dnaE; DNA polymerase III subunit alpha; Psort location: Cytoplasmic, score: 9.26.
 
  
 0.629
DnaI
Primosomal protein DnaI; Psort location: Cytoplasmic, score: 8.96.
    
 0.610
nusG
Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination.
  
  
 0.608
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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