STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU57236.1Hypothetical protein; KEGG: mru:mru_1319 1.0e-07 DEAD/DEAH box helicase domain-containing protein; K03725 archaea-specific helicase; Psort location: Cytoplasmic, score: 8.96. (242 aa)    
Predicted Functional Partners:
rlmN
23S rRNA methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
       0.800
KXU57238.1
VanZ-like protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.800
KXU57235.1
Ser/Thr phosphatase family protein; KEGG: stj:SALIVA_1754 5.0e-221 putative 5-nucleotidase; Psort location: Cytoplasmic, score: 8.96.
 
    0.773
KXU59268.1
Hypothetical protein; KEGG: say:TPY_3350 6.6e-05 ruvX; Holliday junction resolvase; K07447 putative holliday junction resolvase; Belongs to the UPF0473 family.
  
     0.716
rpoE
DNA-directed RNA polymerase, delta subunit; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family.
  
     0.672
KXU59150.1
Ribosome biogenesis GTPase YqeH; KEGG: ssr:SALIVB_1731 5.0e-198 nitric-oxide synthase (GTPase) K06948; Psort location: Cytoplasmic, score: 8.96.
  
     0.624
KXU57687.1
HAD hydrolase family; KEGG: ssr:SALIVB_1251 2.0e-130 pho2; 4-nitrophenylphosphatase (PNPPase); Psort location: Cytoplasmic, score: 8.96.
 
  
 0.589
KXU57233.1
Bacteriocin BlpU family protein.
       0.559
KXU57234.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.559
KXU56651.1
KEGG: ssr:SALIVB_1370 4.2e-75 metallopeptidase, SprT family K03095; Psort location: Cytoplasmic, score: 8.96.
  
     0.551
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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