STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU57188.1KEGG: ste:STER_2001 9.0e-73 rRNA large subunit methyltransferase; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase; Psort location: Cytoplasmic, score: 8.96. (159 aa)    
Predicted Functional Partners:
KXU57187.1
Hypothetical protein; KEGG: snc:HMPREF0837_11378 1.9e-15 ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.772
rsfS
Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
  
  
 0.759
KXU57189.1
KEGG: ssr:SALIVB_2155 6.2e-200 htrA; serine protease do-like htrA (HtrALl); Psort location: Periplasmic, score: 9.44.
       0.569
rsmD
RNA methyltransferase, RsmD family; KEGG: ssr:SALIVB_1767 7.2e-87 phosphopantetheine adenylyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.521
KXU59558.1
RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.
  
   
 0.514
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
  
  
 0.496
KXU57942.1
S-adenosylmethionine-dependent methyltransferase, YraL family; KEGG: ssr:SALIVB_1594 7.3e-142 hypothetical protein; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.496
KXU57796.1
NOL1/NOP2/sun family protein; KEGG: stj:SALIVA_1097 1.6e-217 sunL; putative rRNA methyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.458
KXU57190.1
ParB-like protein; KEGG: hhe:HH0423 1.9e-13 parB; transcriptional regulator involved in chromosome partitioning ParB K03497; Psort location: Cytoplasmic, score: 9.26.
       0.428
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
  
  
 0.419
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.