STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU57011.1KEGG: crd:CRES_0153 1.3e-48 ABC transporter ATP-binding protein K09687; Psort location: CytoplasmicMembrane, score: 7.88. (238 aa)    
Predicted Functional Partners:
KXU57012.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.778
KXU57013.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.778
LivF
KEGG: sgg:SGGBAA2069_c17150 3.2e-100 livF; branched-chain amino acid transport system ATP-binding protein K01996; Psort location: Cytoplasmic, score: 9.12.
 
   
 
0.745
KXU57552.1
ABC transporter, ATP-binding protein; KEGG: ljf:FI9785_944 4.8e-42 mutT; ABC transporter ATPase/permease; Psort location: CytoplasmicMembrane, score: 10.00.
  
  0.684
KXU57538.1
ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
  0.543
KXU57015.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: ssa:SSA_0205 9.6e-37 nisK; sensor-receptor histidine kinase NisK K00936; Psort location: CytoplasmicMembrane, score: 10.00.
    
  0.543
KXU57520.1
ABC-2 type transporter; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
  0.535
KXU57014.1
Putative nisin biosynthesis regulatory protein NisR; KEGG: rru:Rru_A0525 5.4e-27 two component transcriptional regulator / cell cycle transcriptional regulator CtrA K13584; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.515
CbiO4
Hypothetical protein; KEGG: stj:SALIVA_2067 7.0e-57 cobalt import ATP-binding protein cbiO 1; Psort location: CytoplasmicMembrane, score: 9.82.
  
 
  0.483
KXU59596.1
ABC transporter, ATP-binding protein; KEGG: stj:SALIVA_0225 3.4e-112 lolD; lipoprotein-releasing system ATP-binding protein lolD; Psort location: CytoplasmicMembrane, score: 7.88.
 
 
0.474
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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