STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU56941.1Transcriptional regulator, Spx/MgsR family; KEGG: ssr:SALIVB_1615 4.0e-54 arsenate reductase. (117 aa)    
Predicted Functional Partners:
KXU56942.1
KEGG: stj:SALIVA_1574 8.6e-68 ogt; putative methylated-DNA--protein-cysteine S-methyltransferase; Psort location: Cytoplasmic, score: 9.26.
       0.708
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.615
sigA
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
    
   0.613
SerA
KEGG: stf:Ssal_00539 1.2e-201 serA; phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase; Psort location: Cytoplasmic, score: 9.26; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.585
KXU56944.1
KEGG: sds:SDEG_0457 1.4e-58 GNAT family acetyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.560
SpxA2
KEGG: ste:STER_0078 3.9e-63 spxA; transcriptional regulator Spx; K00537 arsenate reductase; Psort location: Cytoplasmic, score: 8.96; Belongs to the ArsC family.
  
   
 0.554
serC
Phosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.
       0.552
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.511
KXU58290.1
Hypothetical protein; KEGG: ssr:SALIVB_2004 1.2e-102 rpoC; DNA-directed RNA polymerase subunit beta K03046; Psort location: Cytoplasmic, score: 9.97.
    
   0.511
KXU57556.1
KEGG: stf:Ssal_00827 5.5e-160 msrAB; methionine-R-sulfoxide reductase; K12267 peptide methionine sulfoxide reductase msrA/msrB; Psort location: Cytoplasmic, score: 9.97.
     
 0.505
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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