STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xthExodeoxyribonuclease III; KEGG: stj:SALIVA_1604 1.8e-147 exoA; exodeoxyribonuclease; Psort location: Cytoplasmic, score: 9.97. (275 aa)    
Predicted Functional Partners:
Nth1
Endonuclease III; KEGG: stf:Ssal_01295 1.2e-109 nth; endonuclease III; K10773 endonuclease III; Psort location: Cytoplasmic, score: 9.97.
 
 0.991
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
 0.904
DnaN
KEGG: ssr:SALIVB_0002 1.2e-185 dnaN; beta subunit of DNA polymerase III; K02338 DNA polymerase III subunit beta; Psort location: Cytoplasmic, score: 9.26.
   
 0.886
MutY
KEGG: stj:SALIVA_1827 1.0e-197 mutY; A/G-specific adenine glycosylase; Psort location: Cytoplasmic, score: 9.97.
    
 0.854
BirA
biotin--[acetyl-CoA-carboxylase] ligase; KEGG: stj:SALIVA_0965 1.5e-159 birA; bifunctional biotin operon repressor/biotin--[acetyl-CoA-carboxylase] synthetase; Psort location: Cytoplasmic, score: 9.26.
  
    0.826
fusA
Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]
  
 0.790
KXU56271.1
KEGG: stn:STND_0993 2.7e-112 uracil-DNA glycosylase; K03648 uracil-DNA glycosylase; Psort location: Cytoplasmic, score: 9.26.
  
 0.788
KXU56930.1
Pseudouridylate synthase; KEGG: stj:SALIVA_1559 4.8e-113 rsuA2; pseudouridine synthase; Psort location: Cytoplasmic, score: 9.97.
  
    0.752
KXU59501.1
Ribosomal protein L7Ae.
   
 
  0.704
KXU57945.1
KEGG: stf:Ssal_01672 5.7e-142 holB; DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta'; Psort location: Cytoplasmic, score: 9.97.
   
  0.664
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.