STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU56463.1Peptidase, A24 family; KEGG: stf:Ssal_01387 4.1e-61 comC; prepilin peptidase type IV; K02236 leader peptidase (prepilin peptidase) / N-methyltransferase; Psort location: CytoplasmicMembrane, score: 10.00. (169 aa)    
Predicted Functional Partners:
KXU58294.1
Bacterial type II secretion system protein F domain protein; KEGG: pfe:PSF113_5005 1.7e-05 pilC; protein PilC K02653; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.712
DprA
KEGG: apb:SAR116_0616 5.4e-43 DNA protecting protein DprA K04096; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.706
ComGA
Type II/IV secretion system protein; KEGG: pfe:PSF113_0439 4.0e-31 xcpR; protein XcpR K02454; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.682
KXU56793.1
DNA internalization competence protein ComEC/Rec2-like protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.678
KXU58297.1
Hypothetical protein.
  
  
 0.670
KXU56794.1
comEA protein; KEGG: has:Halsa_0780 8.4e-06 glycogen/starch synthase K00703; Psort location: CytoplasmicMembrane, score: 9.82.
   
  
 0.637
ComGC
Prepilin-type cleavage/methylation protein; KEGG: pfe:PSF113_5031 0.00033 pilE; protein PilE K02655.
  
  
 0.618
KXU56680.1
dephospho-CoA kinase; KEGG: stu:STH8232_0813 4.3e-89 coaE; dephospho-CoA kinase; K00859 dephospho-CoA kinase; Psort location: Cytoplasmic, score: 9.97.
 
    0.549
KXU56464.1
Ferritin-like protein; KEGG: ssr:SALIVB_1308 1.2e-77 dps; DNA protection during starvation protein K04047; Psort location: Cytoplasmic, score: 9.26.
     
 0.531
KXU58298.1
Prepilin-type cleavage/methylation protein.
  
  
 0.510
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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