STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU56407.1LPXTG-motif protein cell wall anchor domain protein; KEGG: snm:SP70585_0124 0.00010 beta-N-acetylhexosaminidase K12373. (421 aa)    
Predicted Functional Partners:
KXU59564.1
ScpA/B protein; KEGG: ctc:CTC01529 5.0e-31 scpA; segregation and condensation protein A K05896; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.691
KXU58947.1
Putative bacteriocin transport accessory protein; KEGG: sgg:SGGBAA2069_c19780 3.2e-36 blpT; putative immunity/modification protein.
  
     0.602
KXU56404.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
      
0.536
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
 
 0.489
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
  
 
 0.486
KXU59362.1
Transglycosylase-like domain protein; KEGG: scp:HMPREF0833_11456 1.5e-40 isaA; immunodominant antigen A; Psort location: Extracellular, score: 9.64.
 
    0.431
KXU57679.1
FAD dependent oxidoreductase; KEGG: ssr:SALIVB_1261 3.7e-177 yurR; oxidoreductase yurR; Psort location: Cytoplasmic, score: 8.96.
  
  
  0.408
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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