STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXU56237.1uracil-DNA glycosylase family protein; KEGG: scp:HMPREF0833_10668 1.1e-74 ung2; uracil DNA glycosylase. (194 aa)    
Predicted Functional Partners:
KXU56236.1
Dipeptidase PepV; KEGG: stj:SALIVA_1020 1.4e-234 pepV; beta-Ala-Xaa dipeptidase (Beta-Ala-His dipeptidase) (Peptidase V); Psort location: Cytoplasmic, score: 8.96.
     
 0.706
KXU58972.1
Universal bacterial protein YeaZ; KEGG: ssr:SALIVB_1907 1.9e-109 glycoprotein endopeptidase; Psort location: Cytoplasmic, score: 8.96.
  
    0.550
SsbB
Single-strand binding family protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
   
   0.517
SsbA
Single-strand binding family protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
   
   0.517
XylH
KEGG: sif:Sinf_0835 2.6e-27 xylM; 4-oxalocrotonate tautomerase K01821.
       0.469
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
  
    0.464
Your Current Organism:
Streptococcus salivarius
NCBI taxonomy Id: 1304
Other names: ATCC 7073, CCUG 11878, CCUG 17825, CCUG 50207, CIP 102503, DSM 20560, JCM 5707, LMG 11489, LMG:11489, NCIMB 701779, NCTC 8618, S. salivarius, Streptococcus salivarius subsp. salivarius, Streptococcus sp. FStet12, Streptococcus sp. HSISS4
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