STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KEZ78677.1D-galactarate dehydratase GarD; COG2721 Altronate dehydratase. (388 aa)    
Predicted Functional Partners:
KEZ78678.1
SAF domain-containing protein; COG2721 Altronate dehydratase.
 
  
  0.972
KEZ78665.1
COG2055 Malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family.
 
  
 0.793
KEZ78679.1
COG2188 Transcriptional regulators.
 
   
 0.689
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
 
 0.656
KEZ77054.1
COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family.
 
 
  0.645
KEZ78682.1
COG2055 Malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family.
 
  
 0.634
KEZ78670.1
Hypothetical protein; COG2142 Succinate dehydrogenase, hydrophobic anchor subunit.
 
     0.595
KEZ78669.1
COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit.
 
     0.584
KEZ76615.1
Mannitol dehydrogenase-like protein; COG0246 Mannitol-1-phosphate/altronate dehydrogenases.
  
 
 0.573
KEZ78664.1
COG3181 Uncharacterized protein conserved in bacteria.
 
     0.567
Your Current Organism:
Salinisphaera hydrothermalis
NCBI taxonomy Id: 1304275
Other names: S. hydrothermalis C41B8, Salinisphaera hydrothermalis C41B8
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