STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KEZ77913.1IucA/IucC protein; COG4264 Siderophore synthetase component. (611 aa)    
Predicted Functional Partners:
KEZ77912.1
Rhizobactin siderophore biosynthesis protein RhbF; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.
 
 0.999
KEZ77911.1
L-lysine 6-monooxygenase; COG3486 Lysine/ornithine N-monooxygenase.
 
 
 0.993
KEZ77910.1
Ddc; COG0076 Glutamate decarboxylase and related PLP-dependent proteins.
 
  
 0.957
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
  
 
 0.649
KEZ77909.1
TonB-dependent siderophore receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
 0.647
holA
COG1466 DNA polymerase III, delta subunit.
     
 0.516
KEZ78843.1
COG0236 Acyl carrier protein.
  
 
 0.488
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.488
KEZ76125.1
COG0236 Acyl carrier protein.
  
 
 0.488
KEZ79063.1
COG1042 Acyl-CoA synthetase (NDP forming).
  
 
 0.467
Your Current Organism:
Salinisphaera hydrothermalis
NCBI taxonomy Id: 1304275
Other names: S. hydrothermalis C41B8, Salinisphaera hydrothermalis C41B8
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