STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EOD01870.1NADH/Ubiquinone/plastoquinone (complex I). (530 aa)    
Predicted Functional Partners:
EOD01869.1
NADH-ubiquinone oxidoreductase, chain 4L.
 
 0.999
EOD01863.1
Hypothetical protein.
 
 
 0.998
EOD01864.1
Multiple resistance and pH regulation protein F.
 
 
 0.998
EOD01865.1
Monovalent cation/proton antiporter, MnhG/PhaG subunit.
 
 
 0.998
EOD01868.1
Na+/H+ antiporter MnhB subunit-related protein.
 
 
 0.998
EOD01867.1
Hypothetical protein.
  
 
 0.990
EOD00117.1
NAD-reducing hydrogenase subunit HoxF.
  
 0.978
EOC99418.1
NAD-reducing hydrogenase subunit HoxF.
  
 0.978
EOD00118.1
NADH-quinone oxidoreductase, E subunit.
    
 0.938
EOD00116.1
Periplasmic Fe hydrogenase; Large subunit.
  
 0.915
Your Current Organism:
Caldisalinibacter kiritimatiensis
NCBI taxonomy Id: 1304284
Other names: C. kiritimatiensis, Caldisalinibacter kiritimatiensis Ben Hania et al. 2015, Clostridiaceae bacterium L21-TH-D2, DSM 26826, JCM 18664, strain L21-TH-D2
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