STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EOD01804.1Hypothetical protein. (414 aa)    
Predicted Functional Partners:
EOC99539.1
CsaB protein.
 
     0.643
EOC99537.1
Hypothetical protein.
 
     0.555
EOC99536.1
Poly(glycerol-phosphate) alpha-glucosyltransferase.
 
 
 0.545
EOD01657.1
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase.
 
   
 0.530
EOD01775.1
S-layer protein.
 
     0.505
EOD00102.1
Undecaprenyl-phosphate galactosephosphotransferase.
  
  
 0.492
EOD00108.1
Hypothetical protein.
  
  
 0.459
EOD01803.1
Oligoendopeptidase F.
       0.458
EOD01524.1
S-layer protein.
  
     0.450
EOD00104.1
Glycosyltransferase.
 
 
 0.449
Your Current Organism:
Caldisalinibacter kiritimatiensis
NCBI taxonomy Id: 1304284
Other names: C. kiritimatiensis, Caldisalinibacter kiritimatiensis Ben Hania et al. 2015, Clostridiaceae bacterium L21-TH-D2, DSM 26826, JCM 18664, strain L21-TH-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.