STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EOD01749.1Hypothetical protein. (112 aa)    
Predicted Functional Partners:
EOD01748.1
Hypothetical protein.
  
  
 0.884
EOD01747.1
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
       0.757
EOD01512.1
Stage V sporulation protein AB.
  
     0.637
EOD01511.1
Stage V sporulation protein AA (SpoVAA).
  
     0.579
EOD00888.1
Membrane protein.
  
   
 0.552
EOD01083.1
Hypothetical protein.
  
     0.540
EOC99764.1
Stage III sporulation protein AE.
  
     0.536
EOC99481.1
Hypothetical protein; Probably functions as a manganese efflux pump.
  
     0.513
EOD01881.1
Hypothetical protein.
  
   
 0.500
EOD00753.1
Ribosomal protein S6 glutaminyl transferase.
  
     0.497
Your Current Organism:
Caldisalinibacter kiritimatiensis
NCBI taxonomy Id: 1304284
Other names: C. kiritimatiensis, Caldisalinibacter kiritimatiensis Ben Hania et al. 2015, Clostridiaceae bacterium L21-TH-D2, DSM 26826, JCM 18664, strain L21-TH-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.