STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EOD01674.1Lysine 2,3-aminomutase. (415 aa)    
Predicted Functional Partners:
EOD01671.1
L-beta-lysine 5,6-aminomutase alpha subunit.
 
  
 0.949
EOD01670.1
L-beta-lysine 5,6-aminomutase beta subunit.
 
  
  0.888
EOD01638.1
Chemotaxis protein methyltransferase CheR.
    
   0.774
EOC99261.1
Chemotaxis protein methyltransferase CheR.
    
   0.774
EOD00549.1
[FeFe]-hydrogenase maturation protein HydE.
    
 0.770
EOD01675.1
3,5-diaminohexanoate dehydrogenase.
 
     0.626
EOD01673.1
Hypothetical protein.
 
     0.605
EOD01672.1
MutS domain protein, family 2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity. Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
 
     0.556
EOD00424.1
Pyruvate-flavodoxin oxidoreductase.
   
   0.494
EOC99576.1
Pyruvate-flavodoxin oxidoreductase.
   
   0.494
Your Current Organism:
Caldisalinibacter kiritimatiensis
NCBI taxonomy Id: 1304284
Other names: C. kiritimatiensis, Caldisalinibacter kiritimatiensis Ben Hania et al. 2015, Clostridiaceae bacterium L21-TH-D2, DSM 26826, JCM 18664, strain L21-TH-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.