STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EOD01685.1Spore germination protein. (370 aa)    
Predicted Functional Partners:
EOD01684.1
Spore germination B3.
  
 0.988
EOD01686.1
Spore germination protein GerKA.
 
  
 0.962
EOD01683.1
Stage II sporulation protein required for processing of pro-sigma-E (SpoIIR).
 
     0.856
EOC99783.1
Spore germination protein GerKA.
 
  
 0.823
EOC99781.1
Spore germination B3, GerAC.
 
  
 0.791
EOD01687.1
Hypothetical protein.
       0.780
EOD01681.1
Spore germination protein YpeB.
 
     0.778
EOD01830.1
Hypothetical protein.
 
  
 0.769
EOC99881.1
Spore germination protein GerKA.
 
  
 0.740
EOC99880.1
Hypothetical protein.
 
  
 0.720
Your Current Organism:
Caldisalinibacter kiritimatiensis
NCBI taxonomy Id: 1304284
Other names: C. kiritimatiensis, Caldisalinibacter kiritimatiensis Ben Hania et al. 2015, Clostridiaceae bacterium L21-TH-D2, DSM 26826, JCM 18664, strain L21-TH-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.