Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EOC99952.1 | EOD00082.1 | L21TH_1997 | L21TH_1892 | Hypothetical protein possible functionally linked with Alanyl-tRNA synthetase; Belongs to the UPF0297 family. | RNA polymerase sporulation specific sigma factor SigH; Belongs to the sigma-70 factor family. | 0.429 |
| EOC99952.1 | EOD00962.1 | L21TH_1997 | L21TH_0984 | Hypothetical protein possible functionally linked with Alanyl-tRNA synthetase; Belongs to the UPF0297 family. | Signal recognition particle associated protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein. | 0.757 |
| EOC99952.1 | EOD01490.1 | L21TH_1997 | L21TH_0411 | Hypothetical protein possible functionally linked with Alanyl-tRNA synthetase; Belongs to the UPF0297 family. | Putative tRNA-m1A22 methylase. | 0.725 |
| EOC99952.1 | EOD01651.1 | L21TH_1997 | L21TH_0257 | Hypothetical protein possible functionally linked with Alanyl-tRNA synthetase; Belongs to the UPF0297 family. | Stage V sporulation protein B. | 0.699 |
| EOD00082.1 | EOC99952.1 | L21TH_1892 | L21TH_1997 | RNA polymerase sporulation specific sigma factor SigH; Belongs to the sigma-70 factor family. | Hypothetical protein possible functionally linked with Alanyl-tRNA synthetase; Belongs to the UPF0297 family. | 0.429 |
| EOD00082.1 | EOD01480.1 | L21TH_1892 | L21TH_0443 | RNA polymerase sporulation specific sigma factor SigH; Belongs to the sigma-70 factor family. | Firmicutes ribosomal L7Ae family protein. | 0.485 |
| EOD00082.1 | EOD01651.1 | L21TH_1892 | L21TH_0257 | RNA polymerase sporulation specific sigma factor SigH; Belongs to the sigma-70 factor family. | Stage V sporulation protein B. | 0.633 |
| EOD00962.1 | EOC99952.1 | L21TH_0984 | L21TH_1997 | Signal recognition particle associated protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein. | Hypothetical protein possible functionally linked with Alanyl-tRNA synthetase; Belongs to the UPF0297 family. | 0.757 |
| EOD00962.1 | EOD01490.1 | L21TH_0984 | L21TH_0411 | Signal recognition particle associated protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein. | Putative tRNA-m1A22 methylase. | 0.602 |
| EOD00962.1 | EOD01651.1 | L21TH_0984 | L21TH_0257 | Signal recognition particle associated protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein. | Stage V sporulation protein B. | 0.509 |
| EOD01154.1 | EOD01651.1 | L21TH_0778 | L21TH_0257 | Forespore shell protein. | Stage V sporulation protein B. | 0.552 |
| EOD01186.1 | EOD01651.1 | L21TH_0725 | L21TH_0257 | Glutamine synthetase, clostridia type. | Stage V sporulation protein B. | 0.501 |
| EOD01186.1 | EOD01679.1 | L21TH_0725 | L21TH_0220 | Glutamine synthetase, clostridia type. | DUF1934 domain-containing protein. | 0.400 |
| EOD01186.1 | rpsZ | L21TH_0725 | L21TH_0258 | Glutamine synthetase, clostridia type. | SSU ribosomal protein S14p (S29e); Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.414 |
| EOD01480.1 | EOD00082.1 | L21TH_0443 | L21TH_1892 | Firmicutes ribosomal L7Ae family protein. | RNA polymerase sporulation specific sigma factor SigH; Belongs to the sigma-70 factor family. | 0.485 |
| EOD01480.1 | EOD01651.1 | L21TH_0443 | L21TH_0257 | Firmicutes ribosomal L7Ae family protein. | Stage V sporulation protein B. | 0.468 |
| EOD01480.1 | rpsZ | L21TH_0443 | L21TH_0258 | Firmicutes ribosomal L7Ae family protein. | SSU ribosomal protein S14p (S29e); Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. | 0.980 |
| EOD01490.1 | EOC99952.1 | L21TH_0411 | L21TH_1997 | Putative tRNA-m1A22 methylase. | Hypothetical protein possible functionally linked with Alanyl-tRNA synthetase; Belongs to the UPF0297 family. | 0.725 |
| EOD01490.1 | EOD00962.1 | L21TH_0411 | L21TH_0984 | Putative tRNA-m1A22 methylase. | Signal recognition particle associated protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein. | 0.602 |
| EOD01490.1 | EOD01651.1 | L21TH_0411 | L21TH_0257 | Putative tRNA-m1A22 methylase. | Stage V sporulation protein B. | 0.638 |
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